Felipe P.G. Bergo

Laboratório de Neuroimagem, Faculdade de Ciências Médicas, Unicamp, Brasil. 

Engenheiro de Computação (Unicamp, 2001), Mestre em Ciência da Computação (Unicamp, 2004), Doutor em Ciência da Computação (Unicamp, 2008).
Pós-doutorando no Laboratório de Neuroimagem - Depto. de Neurologia - FCM - Unicamp (2009-2013).

Áreas de Pesquisa: Processamento de imagens, imagens médicas, computação gráfica, reconhecimento de padrões.

Currículo Lattes

Última atualização desta página: Fevereiro de 2017.



Softwares - Publicações/Prêmios


Softwares

SpineSeg - Spinal Cord Segmentation
Segmentação semi-automatica para avaliação de atrofia da medula. Para Linux, *BSD, Mac OS X. Código fonte aberto, disponibilizado sob licença GNU GPL.
SpineSeg
Aftervoxel - 3D Medical Image Visualization
Leitura, visualização e conversão de imagens médicas 3D, para Linux.
Aftervoxel   Aftervoxel
IVS - Interactive Volume Segmentation
Visualização e Segmentação semi-automática de imagens médicas volumétricas (Ressonância Magnética, Tomografia Computadorizada), para Linux.
IVS   IVS   IVS


Publicações/Prêmios

Prêmios

  1. 1º Lugar (Categoria Tese de Doutorado) no XXII Concurso de Teses e Dissertações do XXIX Congresso da Sociedade Brasileira de Computação. Bento Gonçalves, RS, Jul/2009.
  2. Menção Honrosa no Prêmio CAPES de Teses 2009 (Área: Ciência da Computação, divulgado em Nov/2010) ([Listagem de Premiados ] [Nota no site da Unicamp])

Dissertações/Teses

  1. Mestrado/M.Sc: F.P.G. Bergo, Segmentação Interativa de Volumes Baseada em Regiões , Feb 2004, Instituto de Computação, Unicamp, Campinas, SP, Brazil (98 pages).
  2. Doutorado/Ph.D: F.P.G. Bergo, Segmentação de Displasias Corticais Focais em Imagens de Ressonância Magnética do Cérebro Humano , Apr 2008, Instituto de Computação, Unicamp, Campinas, SP, Brazil (114 pages).

Periódicos

  1. GCS Ruppert, G Chiachia, FPG Bergo, FO Favretto, CL Yasuda, A Rocha, AX Falcão
    Medical Image Registration based on Watershed Transform from Greyscale Marker and Multi-scale Parameter Search
    [cópia local ] Comp. Methods in Biomech. and Biomed. Eng.: Imaging & Visualization, 5(2), Apr 2017, pp. 138-156
  2. CL Yasuda, Z Chen, GC Beltramini, AC Coan, ME Morita, B Kubota, F Bergo, C Beaulieu, F Cendes, DW Gross
    Aberrant Topological Patterns of Brain Structural Network in Temporal Lobe Epilepsy
    Epilepsia 56(12), Dec 2015, pp. 1992-2002
  3. TT Hayata, FPG Bergo, TJ Rezende, A Damasceno, BP Damasceno, F Cendes, F Stella, MLF Balthazar
    Cortical Correlates of Affective Syndrome in Dementia Due to Alzheimer's Disease
    Arq. Neuro-Psiquiatria 73(7), Jul 2015, pp. 553-560
  4. CN Fahl, LMT Branco, FPG Bergo, A d'Abreu, I Lopes-Cendes, MC França Jr
    Spinal Cord Damage in Machado-Joseph Disease
    Cerebellum, 14(2), Apr 2015, pp. 128-132
  5. AC Coan, BM Campos, FPG Bergo, BY Kubota, CL Yasuda, ME Morita, CAM Guerreiro, F Cendes
    Patterns of Seizure Control in Patients with Mesial Temporal Lobe Epilepsy with and without Hippocampus Sclerosis
    Arq. Neuro-Psiquiatria, 73(2), Feb 2015, pp. 79-82
  6. D Pacagnella, TM Lopes, ME Morita, CL Yasuda, FAM Cappabianco, F Bergo, MLF Balthazar, AC Coan, F Cendes
    Memory impairment is not necessarily related to seizure frequency in mesial temporal lobe epilepsy with hippocampal sclerosis
    Epilepsia, 55(8), Aug 2014, pp. 1197-1204
  7. CB da Silva, FPG Bergo, A d'Abreu, F Cendes, I Lopes-Cendes, MC Franca Jr
    Dentate nuclei T2 relaxometry is a reliable neuroimaging marker in Friedreich's ataxia
    European Journal of Neurology, 21(8), Aug 2014, pp. 1131-1136
  8. F von Glehn, S Jarius, RPC Lira, MCA Ferreira, FHR von Glehn, SM Costa e Castro, GC Beltramini, FPG Bergo, AS Farias, CO Brandão, B Wildemann, BP Damasceno, F Cendes, LMB Santos, CL Yasuda
    Structural brain abnormalities are related to retinal nerve fiber layer thinning and disease duration in neuromyelitis optica spectrum disorders
    Multiple Sclerosis Journal, 20(9), Aug 2014, pp. 1189-1197
  9. LAY Suemitsu, CL Yasuda, ME Morita, GC Beltramini, AC Coan, F Bergo, I Lopes-Cendes, F Cendes
    Longitudinal analysis of hippocampal T2 relaxometry in FMTLE
    Epilepsy & Behavior, 36, Jul 2014, pp. 154-158
  10. LMT Branco, M de Albuquerque, HMT de Andrade, FPG Bergo, A Nucci, MC França Jr
    Spinal cord atrophy correlates with disease duration and severity in amyotrophic lateral sclerosis
    Amyotrophic Lateral Sclerosis and Frontotemporal Degeneration, 15(1-2), Mar 2014, pp. 93-97
  11. AC Coan, BM Campos, CL Yasuda, BY Kubota, FPG Bergo, CAM Guerreiro, F Cendes
    Frequent Seizures are Associated with a Network of Gray Matter Atrophy in Temporal Lobe Epilepsy
    PLoS ONE, 9(1), Jan 2014, pp. e85843
  12. AC Coan, B Kubota, FPG Bergo, BM Campos, F Cendes
    3T MRI Quantification of Hippocampal Volume and Signal in Mesial Temporal Lobe Epilepsy Improves Detection of Hippocampal Sclerosis
    American Journal of Neuroradiology (AJNR), 35(1), Jan 2014, pp. 77-83
  13. AC Coan, ME Morita, BM Campos, FPG Bergo, BY Kubota, F Cendes
    Amygdala enlargement occurs in patients with mesial temporal lobe epilepsy and hippocampal sclerosis with early epilepsy onset
    Epilepsy & Behavior, 29, Nov 2013, pp. 390-394
  14. RP Guimarães, A d'Abreu, CL Yasuda, MC França Jr, BHB Silva, FAM Cappabianco, FPG Bergo, IT Lopes-Cendes, F Cendes
    A multimodal evaluation of microstructural white matter damage in spinocerebellar ataxia type 3
    Movement Disorders, 28(8), Apr 2013, pp. 1125-1132
  15. CF Chevis, CB da Silva, A d'Abreu, I Lopes-Cendes, F Cendes, FPG Bergo, MC França Jr
    Spinal Cord Atrophy Correlates with Disability in Friedreich's Ataxia
    Cerebellum, 12(1), Feb 2013, pp. 43-47
  16. MLF. Balthazar, CL Yasuda, FRS Pereira, FPG Bergo, F Cendes, BP Damasceno
    Coordinated and circumlocutory semantic naming errors are related to anterolateral temporal lobes in mild AD, aMCI and normal aging
    Journal of the International Neuropsychological Society (JINS), 16(6), Nov 2010, pp.1099-1107
  17. PAV Miranda, AX Falcão, A Rocha, FPG Bergo
    Object delineation by κ-Connected Components
    EURASIP Journal on Advances in Signal Processing, Jun 2008
  18. FPG Bergo, AX Falcão, PAV Miranda, LM Rocha
    Automatic Image Segmentation by Tree Pruning
    [cópia local ] Journal of Mathematical Imaging and Vision, 29(2-3), Nov 2007, pp.141-162
  19. AX Falcão, FPG Bergo
    Interactive volume segmentation with differential image foresting transforms
    [cópia local ] IEEE Transactions on Medical Imaging, 23(9), Sep 2004, pp.1100-1108

Capítulos de Livros

  1. FPG Bergo, AX Falcão, CL Yasuda, GCS Ruppert
    Fast, Accurate and Precise Mid-Sagittal Plane Location in 3D MR Images of the Brain
    in:Biomedical Engineering Systems and Technologies (International Joint Conference, BIOSTEC 2008 Funchal, Madeira, Portugal, January 28-31, 2008 Revised Selected Papers), Eds: A.Fred, J.Filipe, H. Gamboa, CCIS vol. 25, Springer, Berlin, ISBN 978-3-540-92219-3, pp. 278-290, 2009
  2. AX Falcão, FPG Bergo, FO Favretto, GCS Ruppert, PAV Miranda, FAM Cappabianco
    Processamento, Visualização e Análise de Imagens Anatômicas do Cérebro Humano
    [cópia local ], in:Neurociências e Epilepsia, Eds: L.M. Li, P.T. Fernandes, R.J.M. Covolan, F. Cendes, Ed. Plêiade, São Paulo, ISBN 978-85-7651-080-2, pp. 97-124, 2008

Conferências

  1. FPG Bergo, MC França Jr, CF Chevis, F Cendes
    SpineSeg: A Segmentation and Measurement Tool for Evaluation of Spinal Cord Atrophy
    [cópia local ] CISTI'2012 (7ª Conferencia Ibérica de Sistemas y Tecnologia de Información), Jun 2012, Madrid, Spain, vol. 2, pp. 400-403
  2. GCS Ruppert, FO Favretto, AX Falcão, CL Yasuda, FPG Bergo
    Fast and Accurate Image Registration Using the Multiscale Parametric Space and Grayscale Watershed Transform
    [cópia local ], IWSSIP'2010 (17th Intl. Conf. on Systems, Signals and Image Proc.), Jun 2010, Niterói, RJ, Brazil, pp. 457-460
  3. FO Favretto, FPG Bergo, AX Falcão
    A Fast and Automatic Method for 3D Rigid Registration of MR Images of the Human Brain
    SIBGRAPI'2008, Oct 2008, Campo Grande, MS, Brazil, pp. 121-128
  4. FPG Bergo, AX Falcão, CL Yasuda, F Cendes
    FCD Segmentatation using Texture Asymmetry of MR-T1 Images of the Brain
    5th IEEE International Symposium on Biomedical Imaging (ISBI'2008), May 2008, Paris, France, pp. 424-427
  5. FPG Bergo, GCS Ruppert, LF Pinto, AX Falcão
    Fast and robust mid-sagittal plane location in 3D MR images of the brain
    Intl. Conf. on Bio-inspired Systems and Signal Proc (BIOSIGNALS 2008) Jan 2008, Funchal, Portugal, pp. 92-99
  6. FPG Bergo, AX Falcão
    A Partitioned Algorithm for the Image Foresting Transform
    8th Intl. Symposium Mathematical Morphology (ISMM'07), Oct 2007, Rio de Janeiro, RJ, Brazil, pp. 425-436.
  7. PAV Miranda, FPG Bergo, LM Rocha, AX Falcão
    Tree-pruning: A New Algorithm and its Comparative Analysis with the Watershed Transform for Automatic Image Segmentation
    SIBGRAPI'2006, Oct 2006, Manaus, AM, Brazil, pp. 37-44.
  8. F de Goes, FPG Bergo, AX Falcão, S Goldenstein, L Velho
    Adapted Dynamic Meshes for Deformable Surfaces
    SIBGRAPI'2006, Oct 2006, Manaus, AM, Brazil, pp. 213-220.
  9. FPG Bergo, AX Falcão
    Fast and Automatic Curvilinear Reformatting of MR Images of the Brain for Diagnosis of Dysplastic Lesions
    3rd IEEE International Symposium on Biomedical Imaging (ISBI'2006), Apr 2006, Arlington, VA, USA, pp. 486-489
  10. AX Falcão, PAV Miranda, A Rocha, FPG Bergo
    Object Detection by K-Connected Seed Competition
    Proc. 18th Brazilian Symposium on Computer Graphics and Image Processing (SIBGRAPI), Oct 2005, Natal, RN, Brazil, pp. 97-104
  11. AX Falcão, FPG Bergo, PAV Miranda
    Image segmentation by tree pruning
    Proc. 17th Brazilian Symposium on Computer Graphics and Image Processing (SIBGRAPI), Oct 2004, Curitiba, PR, Brazil, pp. 65-71
  12. AX Falcão, FPG Bergo
    The Iterative Image Foresting Transform and its application to User-steered 3D segmentation
    SPIE Medical Imaging, Feb 2003, San Diego, CA, USA, pp. 1464-1475

Resumos

  1. BHB Silva, R Guimaraes, F Bergo, M Franca, A d'Abreu, I Lopes-Cendes, F Cendes
    MRI T2-Relaxometry in Spinocerebellar Ataxia Type 3 (Machado-Joseph Disease)
    64th American Academy of Neurology Meeting, Apr 2012, New Orleans, LA, P05.024 (poster)
  2. CB Silva, FPG Bergo, A d'Abreu, I Lopes-Cendes, MC França Jr
    T2 Relaxation Time Correlates with Disease Severity in Friedreich's Ataxia
    64th American Academy of Neurology Meeting, Apr 2012, New Orleans, LA, P05.012 (poster)
  3. FPG Bergo, WM Avelar, F Cendes
    LNIDB: An Image Archival, Retrieval and Visualization System for Medical Imaging Research Centers
    V Workshop CinAPCe, Aug 2011, São Paulo, SP, Brasil.
  4. CF Chevis, MC França Jr, FPG Bergo, A D'Abreu, RP Guimarães, I Lopes-Cendes, F Cendes
    Distinct Patterns of Spinal Cord Atrophy in Machado-Joseph Disease and Friedreich's Ataxia
    63rd American Academy of Neurology Meeting, Apr 2011, Honolulu, HI, USA, P05.147 (poster)
  5. CL Yasuda, FAM Cappabianco, FRS Pereira, ALF Costa, AV Saude, FPG Bergo, AC Coan, LE Betting, F Cendes
    VBM and Cortical analysis in patients with focal cortical dysplasia reveal areas with widespread GM abnormalities in cortex and cerebellum
    IV Workshop CinAPCe, Aug 2010, São Carlos, SP, Brasil, poster 171
  6. M França Jr, FPG Bergo, A D'Abreu, L Bonadia, M Silva, I Lopes-Cendes, F Cendes
    Spinal Cord Atrophy Correlates with Clinical Disability in Friedreich Ataxia
    62nd American Academy of Neurology Meeting, Apr 2010, Toronto, Canada, P03.221 (poster)
  7. FPG Bergo, AX Falcão, CL Yasuda, GCS Ruppert
    Accurate and Precise Mid-Sagittal Plane Location in 3D MR Images of the Brain
    III Workshop CinAPCe, Aug 2009, Ribeirão Preto, SP, Brasil, pp. 9-9
  8. FPG Bergo, AX Falcão
    Focal Cortical Dysplasia Segmentation in 3D Magnetic Resonance Images of the Human Brain
    XXII Concurso de Teses e Dissertações, XXIX Congresso da Sociedade Brasileira de Computação, Jul 2009, Bento Gonçalves, RS, Brazil, pp. 9-9
  9. FPG Bergo, GCS Ruppert, LF Pinto, AX Falcão
    Fast and precise Mid-Sagittal Plane Location in 3D MR Images of the Brain
    II Workshop CInAPCe, Jun 2008, Campinas, SP, Brazil, pp. 302-303.
  10. FO Favretto, FPG Bergo, AX Falcão
    A Rigid Registration Method for 3D MR Images of the Human Brain
    II Workshop CInAPCe, Jun 2008, Campinas, SP, Brazil, pp. 305-307
  11. F de Goes, FPG Bergo, AX Falcão, S Goldenstein, L Velho
    Dynamic Meshes for Deformable Surfaces
    ACM SIGGRAPH'06, Aug 2006, Boston, MA, USA, poster #88.